Detecting regularities on grammar-compressed strings

Tomohiro I, Wataru Matsubara, Kouji Shimohira, Shunsuke Inenaga, Hideo Bannai, Masayuki Takeda, Kazuyuki Narisawa, Ayumi Shinohara

研究成果: Article査読

12 被引用数 (Scopus)

抄録

We address the problems of detecting and counting various forms of regularities in a string represented as a straight-line program (SLP) which is essentially a context free grammar in the Chomsky normal form. Given an SLP of size n that represents a string s of length N, our algorithm computes all runs and squares in s in O(n3h) time and O(n2) space, where h is the height of the derivation tree of the SLP. We also show an algorithm to compute all gapped-palindromes in O(n3h + gnh log N) time and O(n2) space, where g is the length of the gap. As one of the main components of the above solution, we propose a new technique called approximate doubling which seems to be a useful tool for a wide range of algorithms on SLPs. Indeed, we show that the technique can be used to compute the periods and covers of the string in O(n2h) time and O(nh(n + log2 N)) time, respectively.

本文言語English
ページ(範囲)74-89
ページ数16
ジャーナルInformation and Computation
240
DOI
出版ステータスPublished - 2015 2 1

ASJC Scopus subject areas

  • 理論的コンピュータサイエンス
  • 情報システム
  • コンピュータ サイエンスの応用
  • 計算理論と計算数学

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