TY - GEN
T1 - A new dynamical domain decomposition method for parallel molecular dynamics simulation
AU - Zhakhovskii, V.
AU - Nishihara, K.
AU - Fukuda, Y.
AU - Shimojo, S.
AU - Akiyama, T.
AU - Miyanaga, S.
AU - Sone, H.
AU - Kobayashi, H.
AU - Ito, E.
AU - Seo, Y.
AU - Tamura, M.
AU - Ueshima, Y.
PY - 2005
Y1 - 2005
N2 - A new material particle dynamical domain decomposition method M P D 3 has been developed. The method is suitable for a large scale parallel molecular dynamic simulation on a heterogeneous computing net. Performance of the M P D3 algorithm is tested in various computing environments, such as PC clusters, super computer clusters, and Grid. It is shown that the M P D3 algorithm is highly adaptive for both computer clusters and Grid computing environments, even if other programs are running on the same computer environment.
AB - A new material particle dynamical domain decomposition method M P D 3 has been developed. The method is suitable for a large scale parallel molecular dynamic simulation on a heterogeneous computing net. Performance of the M P D3 algorithm is tested in various computing environments, such as PC clusters, super computer clusters, and Grid. It is shown that the M P D3 algorithm is highly adaptive for both computer clusters and Grid computing environments, even if other programs are running on the same computer environment.
UR - http://www.scopus.com/inward/record.url?scp=33845307600&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=33845307600&partnerID=8YFLogxK
U2 - 10.1109/CCGRID.2005.1558650
DO - 10.1109/CCGRID.2005.1558650
M3 - Conference contribution
AN - SCOPUS:33845307600
SN - 0780390741
SN - 9780780390744
T3 - 2005 IEEE International Symposium on Cluster Computing and the Grid, CCGrid 2005
SP - 848
EP - 854
BT - 2005 IEEE International Symposium on Cluster Computing and the Grid, CCGrid 2005
T2 - 2005 IEEE International Symposium on Cluster Computing and the Grid, CCGrid 2005
Y2 - 9 May 2005 through 12 May 2005
ER -