Gene networks viewed through two models

Satoru Miyano; Rui Yamaguchi; Yoshinori Tamada; Masao Nagasaki; Seiya Imoto

doi:10.1007/978-3-642-00727-9_8

Gene networks viewed through two models

Satoru Miyano, Rui Yamaguchi, Yoshinori Tamada, Masao Nagasaki, Seiya Imoto

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Abstract

This paper presents our computational and measurement strategy for investigating gene networks from gene expression data using state space model and dynamic Bayesian network model with nonparametric regression. These methods are applied to gene expression data based on gene knockdowns and drug responses for generating large global maps of gene regulation which will light up the geography where drug target pathways lie down.

Original language	English
Title of host publication	Bioinformatics and Computational Biology - First International Conference, BICoB 2009, Proceedings
Pages	54-66
Number of pages	13
DOIs	https://doi.org/10.1007/978-3-642-00727-9_8
Publication status	Published - 2009 Aug 11
Externally published	Yes
Event	1st International Conference on Bioinformatics and Computational Biology, BICoB 2009 - New Orleans, LA, United States Duration: 2009 Apr 8 → 2009 Apr 10

Publication series

Name	Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume	5462 LNBI
ISSN (Print)	0302-9743
ISSN (Electronic)	1611-3349

Other

Other	1st International Conference on Bioinformatics and Computational Biology, BICoB 2009
Country	United States
City	New Orleans, LA
Period	09/4/8 → 09/4/10

ASJC Scopus subject areas

Theoretical Computer Science
Computer Science(all)

Access to Document

10.1007/978-3-642-00727-9_8

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Miyano, S., Yamaguchi, R., Tamada, Y., Nagasaki, M., & Imoto, S. (2009). Gene networks viewed through two models. In Bioinformatics and Computational Biology - First International Conference, BICoB 2009, Proceedings (pp. 54-66). (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 5462 LNBI). https://doi.org/10.1007/978-3-642-00727-9_8

Gene networks viewed through two models. / Miyano, Satoru; Yamaguchi, Rui; Tamada, Yoshinori; Nagasaki, Masao; Imoto, Seiya.

Bioinformatics and Computational Biology - First International Conference, BICoB 2009, Proceedings. 2009. p. 54-66 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 5462 LNBI).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Miyano, S, Yamaguchi, R, Tamada, Y, Nagasaki, M & Imoto, S 2009, Gene networks viewed through two models. in Bioinformatics and Computational Biology - First International Conference, BICoB 2009, Proceedings. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 5462 LNBI, pp. 54-66, 1st International Conference on Bioinformatics and Computational Biology, BICoB 2009, New Orleans, LA, United States, 09/4/8. https://doi.org/10.1007/978-3-642-00727-9_8

Miyano S, Yamaguchi R, Tamada Y, Nagasaki M, Imoto S. Gene networks viewed through two models. In Bioinformatics and Computational Biology - First International Conference, BICoB 2009, Proceedings. 2009. p. 54-66. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)). https://doi.org/10.1007/978-3-642-00727-9_8

Miyano, Satoru ; Yamaguchi, Rui ; Tamada, Yoshinori ; Nagasaki, Masao ; Imoto, Seiya. / Gene networks viewed through two models. Bioinformatics and Computational Biology - First International Conference, BICoB 2009, Proceedings. 2009. pp. 54-66 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)).

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