Complete structure of the chloroplast genome of Arabidopsis thaliana

Shusei Sato, Yasukazu Nakamura, Takakazu Kaneko, Erika Asamizu, Satoshi Tabata

Research output: Contribution to journalArticlepeer-review

376 Citations (Scopus)


The complete nucleotide sequence of the chloroplast genome of Arabidopsis thaliana has been determined. The genome as a circular DNA composed of 154,478 bp containing a pair of inverted repeats of 26,264 bp, which are separated by small and large single copy regions of 17,780 bp and 84,170 bp, respectively. A total of 87 potential protein-coding genes including 8 genes duplicated in the inverted repeat regions, 4 ribosomal RNA genes and 37 tRNA genes (30 gene species) representing 20 amino acid species were assigned to the genome on the basis of similarity to the chloroplast genes previously reported for other species. The translated amino acid sequences from respective potential protein-coding genes showed 63.9% to 100% sequence similarity to those of the corresponding genes in the chloroplast genome of Nicotiana tabacum, indicating the occurrence of significant diversity in the chloroplast genes between two dicot plants. The sequence data and gene information are available on the World Wide Web database KAOS (Kazusa Arabidopsis data Opening Site) at

Original languageEnglish
Pages (from-to)283-290
Number of pages8
JournalDNA Research
Issue number5
Publication statusPublished - 1999
Externally publishedYes


  • Arabidopsis thaliana
  • Chloroplast
  • Genome sequencing

ASJC Scopus subject areas

  • Molecular Biology
  • Genetics


Dive into the research topics of 'Complete structure of the chloroplast genome of Arabidopsis thaliana'. Together they form a unique fingerprint.

Cite this