Complete genome sequence of Sphingopyxis macrogoltabida strain 203N (NBRC 111659), a polyethylene glycol degrader

Yoshiyuki Ohtsubo, Shouta Nonoyama, Yuji Nagata, Mitsuru Numata, Keiko Tsuchikane, Akira Hosoyama, Atsushi Yamazoe, Masataka Tsuda, Nobuyuki Fujita, Fusako Kawai

    Research output: Contribution to journalArticlepeer-review

    5 Citations (Scopus)

    Abstract

    We determined the complete genome sequence of Sphingopyxis macrogoltabida strain 203N, a polyethylene glycol degrader. Because the PacBio assembly (285×coverage) seemed to be full of nucleotide-level mismatches, the Newbler assembly of MiSeq mate-pair and paired-end data was used for finishing and the PacBio assembly was used as a reference. The PacBio assembly carried 414 nucleotide mismatches over 5,953,153 bases of the 203N genome.

    Original languageEnglish
    Article numbere00529-16
    JournalGenome Announcements
    Volume4
    Issue number3
    DOIs
    Publication statusPublished - 2016

    ASJC Scopus subject areas

    • Molecular Biology
    • Genetics

    Fingerprint Dive into the research topics of 'Complete genome sequence of Sphingopyxis macrogoltabida strain 203N (NBRC 111659), a polyethylene glycol degrader'. Together they form a unique fingerprint.

    Cite this