Characterization of polymorphic microsatellite markers isolated from the relict perennial Veratrum stamineum var. micranthum Satake (Melanthiaceae)

Ryo Kikuchi; Masayuki Maki

doi:10.1007/s12686-011-9390-y

Characterization of polymorphic microsatellite markers isolated from the relict perennial Veratrum stamineum var. micranthum Satake (Melanthiaceae)

Ryo Kikuchi, Masayuki Maki

Botanical Gardens

Research output: Contribution to journal › Article › peer-review

1 Citation (Scopus)

Abstract

Veratrum stamineum var. micranthum is a perennial herb listed in the Red Data Book of Japan that is geographically restricted to central Japan. We developed 10 polymorphic microsatellite markers to examine genetic variability in this species. The observed and expected heterozygosities ranged from 0.333-1.000 and 0.370-0.898, respectively. Two of the 10 loci significantly deviated from Hardy-Weinberg equilibrium, suggesting biparental inbreeding due to population size contraction or existence of null alleles. These markers will be useful in population genetic studies and for the preservation of V. stamineum var. micranthum.

Original language	English
Pages (from-to)	507-509
Number of pages	3
Journal	Conservation Genetics Resources
Volume	3
Issue number	3
DOIs	https://doi.org/10.1007/s12686-011-9390-y
Publication status	Published - 2011 Jul

Keywords

Lowland marsh
Melanthiaceae
Microsatellite markers
Relict species
Veratrum stamineum var. micranthum

ASJC Scopus subject areas

Ecology, Evolution, Behavior and Systematics
Genetics

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10.1007/s12686-011-9390-y

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abstract = "Veratrum stamineum var. micranthum is a perennial herb listed in the Red Data Book of Japan that is geographically restricted to central Japan. We developed 10 polymorphic microsatellite markers to examine genetic variability in this species. The observed and expected heterozygosities ranged from 0.333-1.000 and 0.370-0.898, respectively. Two of the 10 loci significantly deviated from Hardy-Weinberg equilibrium, suggesting biparental inbreeding due to population size contraction or existence of null alleles. These markers will be useful in population genetic studies and for the preservation of V. stamineum var. micranthum.",

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author = "Ryo Kikuchi and Masayuki Maki",

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AU - Kikuchi, Ryo

AU - Maki, Masayuki

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N2 - Veratrum stamineum var. micranthum is a perennial herb listed in the Red Data Book of Japan that is geographically restricted to central Japan. We developed 10 polymorphic microsatellite markers to examine genetic variability in this species. The observed and expected heterozygosities ranged from 0.333-1.000 and 0.370-0.898, respectively. Two of the 10 loci significantly deviated from Hardy-Weinberg equilibrium, suggesting biparental inbreeding due to population size contraction or existence of null alleles. These markers will be useful in population genetic studies and for the preservation of V. stamineum var. micranthum.

AB - Veratrum stamineum var. micranthum is a perennial herb listed in the Red Data Book of Japan that is geographically restricted to central Japan. We developed 10 polymorphic microsatellite markers to examine genetic variability in this species. The observed and expected heterozygosities ranged from 0.333-1.000 and 0.370-0.898, respectively. Two of the 10 loci significantly deviated from Hardy-Weinberg equilibrium, suggesting biparental inbreeding due to population size contraction or existence of null alleles. These markers will be useful in population genetic studies and for the preservation of V. stamineum var. micranthum.

KW - Lowland marsh

KW - Melanthiaceae

KW - Microsatellite markers

KW - Relict species

KW - Veratrum stamineum var. micranthum

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DO - 10.1007/s12686-011-9390-y

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Characterization of polymorphic microsatellite markers isolated from the relict perennial Veratrum stamineum var. micranthum Satake (Melanthiaceae)

Abstract

Keywords

ASJC Scopus subject areas

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