A 1.2-Megabase BAC/PAC contig spanning the 14q13 breakpoint of t(2;14) in a mirror-image polydactyly patient

Naomichi Matsumoto; Eiichi Soeda; Hirofumi Ohashi; Masahiro Fujimoto; Rumiko Kato; Takahiro Tsujita; Hiroaki Tomita; Shinji Kondo; Yoshimitsu Fukushima; Norio Niikawa

doi:10.1006/geno.1997.4897

A 1.2-Megabase BAC/PAC contig spanning the 14q13 breakpoint of t(2;14) in a mirror-image polydactyly patient

Naomichi Matsumoto, Eiichi Soeda, Hirofumi Ohashi, Masahiro Fujimoto, Rumiko Kato, Takahiro Tsujita, Hiroaki Tomita, Shinji Kondo, Yoshimitsu Fukushima, Norio Niikawa

Research output: Contribution to journal › Article › peer-review

22 Citations (Scopus)

Abstract

We previously assigned a 14q13 breakpoint of t(2;14) in a patient with mirror-image polydactyly to a segment between two loci, AFM200ZH4 and D14S306, within a genetic distance of 0.6 cM. In the present study, we constructed a 1.2-Mb high-resolution physical map with a contig composed of 16 bacterial artificial chromosomes (BACs) and 6 P1-derived artificial chromosomes (PACs) at a region around the breakpoint, extending from D14S75 to D14S728 loci. Thirty-four novel sequence-tagged sites (STSs) were also characterized at this region. Of nine ESTs that had been mapped between D14S75 and D14S288, T99065 was confirmed to be in two BAC clones, B102 and B319. This BAC/PAC contig with STSs is useful for further genomic sequencing, for construction of a transcription map, arid for the isolation of the putative gene for mirror-image polydactyly.

Original language	English
Pages (from-to)	11-16
Number of pages	6
Journal	Genomics
Volume	45
Issue number	1
DOIs	https://doi.org/10.1006/geno.1997.4897
Publication status	Published - 1997 Oct 1
Externally published	Yes

ASJC Scopus subject areas

Genetics

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A 1.2-Megabase BAC/PAC contig spanning the 14q13 breakpoint of t(2;14) in a mirror-image polydactyly patient. / Matsumoto, Naomichi; Soeda, Eiichi; Ohashi, Hirofumi; Fujimoto, Masahiro; Kato, Rumiko; Tsujita, Takahiro; Tomita, Hiroaki; Kondo, Shinji; Fukushima, Yoshimitsu; Niikawa, Norio.

In: Genomics, Vol. 45, No. 1, 01.10.1997, p. 11-16.

Research output: Contribution to journal › Article › peer-review

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abstract = "We previously assigned a 14q13 breakpoint of t(2;14) in a patient with mirror-image polydactyly to a segment between two loci, AFM200ZH4 and D14S306, within a genetic distance of 0.6 cM. In the present study, we constructed a 1.2-Mb high-resolution physical map with a contig composed of 16 bacterial artificial chromosomes (BACs) and 6 P1-derived artificial chromosomes (PACs) at a region around the breakpoint, extending from D14S75 to D14S728 loci. Thirty-four novel sequence-tagged sites (STSs) were also characterized at this region. Of nine ESTs that had been mapped between D14S75 and D14S288, T99065 was confirmed to be in two BAC clones, B102 and B319. This BAC/PAC contig with STSs is useful for further genomic sequencing, for construction of a transcription map, arid for the isolation of the putative gene for mirror-image polydactyly.",

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AU - Ohashi, Hirofumi

AU - Fujimoto, Masahiro

AU - Kato, Rumiko

AU - Tsujita, Takahiro

AU - Tomita, Hiroaki

AU - Kondo, Shinji

AU - Fukushima, Yoshimitsu

AU - Niikawa, Norio

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